FY 2007 Solicitation Homepage

Project Proposal Request for FY 2007 - FY 2009 Funding

Proposal 200702600: Historic Changes in Organic Nutrient Sources and Productivity Proxies in the Columbia River Estuary in Relation to Juvenile Salmon Habitat Restoration Priorities

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Table of Contents
Part 1. Administration and Budgeting
Section 1: General Administrative
Section 2: Project Location
Section 3: Project Species
Section 4: Past Accomplishments
Section 5: Relationship to Other Projects
Section 6: Biological Objectives
Section 7: Work Elements
Section 8: Budget
Section 9: Project Future
Section 10: Documents
Part 2. Reviews
Part 1 of 2. Administration and Budgeting
Section 1: General Administrative Information
Process Information:
Date Proposal Submitted & Finalized Status Form Generator
January 10, 2006 Finalized Linda Bingler

Proposal Type: New
Proposal Number: 200702600
Proposal Name: Historic Changes in Organic Nutrient Sources and Productivity Proxies in the Columbia River Estuary in Relation to Juvenile Salmon Habitat Restoration Priorities
Agency, Institution or Organization: Pacific Northwest National Laboratory
Short Description: We propose to establish the historical trends of organic nutrient sources and productivity proxies in existing sediment cores from the Columbia River Estuary to prioritize habitat restoration opportunities for salmon survival.
Information Transfer: Technical reports, conference and workshop presentations, and peer-reviewed publications.
 
Project Proposal Contacts
Contact Organization Address Phone/Email Roles Notes
Form Submitter
Linda Bingler Pacific Northwest National Laboratory Marine Science Operations 1529 West Sequim Bay Road
Sequim, WA 98382
Ph: 360-681-3627
Fax: 360-681-3699
Email: l.bingler@pnl.gov
Form Submitter
All Assigned Contacts
Linda Bingler Pacific Northwest National Laboratory Marine Science Operations 1529 West Sequim Bay Road
Sequim, WA 98382
Ph: 360-681-3627
Fax: 360-681-3699
Email: l.bingler@pnl.gov
Project Lead
Curt Peterson Portland State University 17 Cramer Hall, 1721 SW Broadway, PO Box 751
Portland, OR, 97207-0751
Ph: 503-725-3375
Fax: 503-725-3025
Email: petersonc@pdx.edu
Project Lead

Section 2: Project Location
Sponsor Province: Columbia Estuary ARG Province: No Change
Sponsor Subbasin: Columbia Estuary ARG Subbasin: No Change
Location(s) at which the action will be implemented
Latitude Longitude Waterbody Location Description County/State Subbasin Primary?
Columbia River Estuary Columbia River Estuary, mouth to Bonneville Dam (with control sites in Grays Harbor Estuary and Willapa Bay, Washington) Oregon/Washington, Columbia Estuary Yes

Section 3: Focal Species
Focal Species:
Primary Secondary Additional Species
Chinook Lower Columbia River ESU
Chum Columbia River ESU

Section 4: Past Accomplishments
Past Accomplishments for Each Fiscal Year of This Project This proposal is for funding a new project, and has no past accomplishments.

Section 5: Relationships to Other Projects
Other Current Projects Related to this Project (any funding source)
Funding Source Related ID Related Project Title Relationship
Other: USGS-Coastal and Marine [no entry] Columbia River Littoral Cell: Regional Sediment Management Funded sediment core collection from Columbia River Estuary, Grays Harbor Estuary and Willapa Bay
Other: USGS-biological survey [no entry] Historical Changes in the Columbia River estuary based on sediment core: feasibility studies Funded pilot project for the determination of productivity proxies.
BPA 200201200 Lower Columbia Habitat Mapping We will consult maps from this project
Other: USACE 2002-012-00 LCRE Habitat Mapping We will consult maps from this project
BPA 200207700 Estuary/Ocean Rme Support We will inform this study of our results.
BPA 200300700 Lwr Col River/Est Eco Monitor We will coordinate and integrate our study with this one.
BPA 200301000 Historic Hab Food Web Link Sal We will integrate our results with these
BPA 200301100 Columbia R/Estuary Habitat We will inform this project of our findings
BPA 200301100 Columbia R/Estuary Habitat We will inform this effort of our work, which will be useful in their prioritization process
Other: Oregon State 2003-011-00 Technical Basis for Prioritization of Habitat Restoration Projects in the LCRE We will inform this effort of our work, which will be useful in their prioritization
BPA 200303600 CBFWA Monitor/Eval Program We will inform CSMEP of our efforts
Other: LCREP/LCFRB 2004 The Mainstem Lower Columbia River and Columbia River Estuary Subbasin Plan This project will address the physical objectives (PO1,2,3,5,32) and strategies (1,3,4,12,18,24) of the Separate Bi-State Plan
BPA 200400200 PNAMP Funding We will inform this effort of our work
Other: USACE EST-P-02-02 Current and Historic Biophysical Linkages in the Estuary We will integrate our results with these
Other: USACE EST-P-04-04 Cumulative Ecosystem Effects of Habitat Restoration We will inform this study of our results.

Section 6: Biological Objectives
Biological Objectives of this Proposed Project
Biological Objective Full Description Associated Subbasin Plan Strategy Page Nos
1. Establish the sources of organic matter to CRE The foundation of the aquatic food chain supporting juvenile salmon consists of organic nutrients in the form of macro- and micro- detritus from both terrestrial and marine origin. An understanding of the source of organic nutrients - terrestrial or marine, macro or micro - is essential to understand the system that supports juvenile salmon populations. Lower Columbia Habitat Subbasin Streams and Watersheds 6-7
2. Analyze productivity proxies in the CRE Using geologic records from the Columbia River Estuary (CRE) in the form of productivity proxies, historical productivity will be determined and compared to control sites. This information will provide a better understanding of the productivity potential of the CRE system and how it has affected support for juvenile salmon. Lower Columbia Habitat Subbasin Streams and Watersheds 6-7
3.Test anthropogenic and natural impacts in CRE Age-dating techniques will be used to establish important time periods for the Columbia River Estuary (CRE). The early historic time period of 1900~1950 should reflect the impacts on organic matter nutrient supply of floodplain and wetland diking. The late-historic period (1950~2000) should reflect impacts on productivity from continued wetland loss, tributary impoundment and flow regulation. Lower Columbia Habitat-Subbasin Streams and Watersheds 6-7
4. Relate CRE productivity to habitat restoration Using the historic trends of organic matter nutrients and relative productivity in the Columbia River Estuary (CRE), we expect to help justify, prioritize, and optimize habitat restoration efforts for juvenile salmon survival. Lower Columbia Habitat Subbasin Streams and Watersheds 6-7

Section 7: Work Elements
Work Elements and Associated Biological Objectives
Work Element Name Work Element Title Description Start Date End Date Estimated Budget
Manage and Administer Projects Manage and administer project, including subcontractors This element encompasses all aspects of managing this project for timliness, data accuracy and validity, budget contraints. 10/1/2006 9/30/2009 $12,299
Biological Objectives Metrics
No Metrics for this Work Element

Produce Annual Report Produce Annual Report Produce Annual Report 10/1/2006 9/30/2009 $31,304
Biological Objectives Metrics
No Metrics for this Work Element

Produce/Submit Scientific Findings Report Produce/Submit Scientific Findings for publication Prepare mauscripts of scientific findings for publication 10/1/2006 9/30/2009 $23,809
Biological Objectives Metrics
No Metrics for this Work Element

Analyze/Interpret Data Analyze/Interpret Data, Prepare Formal Publications Analyze and interpret data through statistical tests and modeling, prepare formal publications of research findings 10/1/2006 9/30/2009 $37,403
Biological Objectives Metrics
Focal Area: Columbia River Estuary, Emerging Issues
Primary R, M, and E Type: Uncertainties research

Collect/Generate/Validate Field and Lab Data Collect, generate, validate field and lab data Collect core sections from vibracores, generate data for C, N, S, d13C, d15N, pigments, Pb-210, Cs-137, C-14, grain size and bulk density, and validate these data by quality assurance review by a third party. 10/1/2006 9/30/2009 $134,992
Biological Objectives Metrics
Focal Area: Columbia River estuary, emerging issues
Primary R, M, and E Type: Uncertainties research

Disseminate Raw/Summary Data and Results Dissemination of data and results through oral and abstract presentation of results, creation of maps The organic matter sources for the CRE will be mapped, the data will be used for GIS applications, and large format maps will be created 10/1/2006 9/30/2009 $53,316
Biological Objectives Metrics
No Metrics for this Work Element

Submit/Acquire Data Electronic transfer of data Data from subcontract laboratories will be transmitted to the sponsor electronically. 10/1/2006 9/30/2009 $6,155
Biological Objectives Metrics
No Metrics for this Work Element


Section 8: Budget

Itemized Estimated Budget
Item Note FY 2007 Cost FY 2008 Cost FY 2009 Cost
Personnel Number of FTEs = 3 $11,206 $23,574 $30,428
Fringe Benefits [blank] $3,877 $7,968 $9,889
Supplies Supplies include sample jars, expendable analytical supplies, reagents $6,048 $1,644 $1,235
Travel Presentations, meetings with coauthors and collaborators $2,601 $2,858 $2,927
Capital Equipment [blank] $ 0 $ 0 $ 0
Overhead [blank] $23,450 $35,105 $42,591
Other Subcontracted work $52,995 $24,747 $16,135
Totals $100,177 $95,896 $103,205

Total Estimated FY 2007-2009 Budgets
Total Itemized Budget$299,278
Total Work Element budget$299,278

Cost sharing
Funding Source or Organization Item or Service Provided FY 2007 Est Value ($) FY 2008 Est Value ($) FY 2009 Est Value ($) Cash or in-kind? Status
Portland State University salary $6,500 $6,500 $6,500 In-Kind Confirmed
USGS-biological survey Pilot study $ 0 $40,000 $ 0 Cash Confirmed
USGS-coastal and marine Core extraction $100,000 $ 0 $ 0 Cash Confirmed
Totals $106,500 $46,500 $6,500

Section 9: Project Future
Project Future Costs and/or Termination
FY 2010 Est Budget FY 2011 Est Budget Comments
$ 0 $ 0
Future Operations & Maintenance Costs
 
Termination Date Comments
9/30/2009
 
Final Deliverables
Final technical report and final interpretive report.

Section 10: Narrative
Document Type Size Date
Narrative for proposal 200702600 doc 601 kb 1/10/2006

Part 2 of 2. Reviews of Proposal
Administrative Review Group (ARG) Results
Account Type:
Expense
No changes were made to this proposal


BPA's in lieu Funding Review of new project proposals (August 3, 2006) [Download letter and table]

BPA's in lieu Rating: 2.2
Approx. BPA share of total costs: BPA 65%
Status of Cost Share: Confirmed
Notes: Nutrient research, fishery managers, others authorized/required


NPCC Final Funding Recommendations (October 23, 2006) [Full NPCC Council Recs]

FY 2007 Budget
$ 0
FY 2008 Budget
$ 0
FY 2009 Budget
$ 0
Total NPCC Rec
$ 0
Budget Type:Expense
Budget Category:ProvinceExpense
Recommendation:Do Not Fund
Comments:


NPCC Draft Funding Recommendations (September 15, 2006) [Full NPCC Council Recs]

FY 2007 Budget
$ 0
FY 2008 Budget
$ 0
FY 2009 Budget
$ 0
Total NPCC Rec
$ 0
FY 2007 MSRT Rec
$ 0
FY 2008 MSRT Rec
$ 0
FY 2009 MSRT Rec
$ 0
Total MSRT Rec
$ 0
Budget Category:Basinwide
Comments:


NPCC Draft Funding Recommendations (September 15, 2006) [Full NPCC Council Recs]

FY 2007 Budget
$ 0
FY 2008 Budget
$ 0
FY 2009 Budget
$ 0
Total NPCC Rec
$ 0
FY 2007 MSRT Rec
$ 0
FY 2008 MSRT Rec
$ 0
FY 2009 MSRT Rec
$ 0
Total MSRT Rec
$ 0
Budget Category:ProvinceExpense
Comments:
NPCC Staff Comments: OR and WA same

Local or MSRT Comments: Project received a Not Fundable recommendation from ISRP. In keeping with OSPIT recommendations, OSPIT will not prioritize a project not deemed fundable by ISRP.


NPCC Draft Funding Recommendations (September 15, 2006) [Full NPCC Council Recs]

FY 2007 Budget
$ 0
FY 2008 Budget
$ 0
FY 2009 Budget
$ 0
Total NPCC Rec
$ 0
FY 2007 MSRT Rec
$ 0
FY 2008 MSRT Rec
$ 0
FY 2009 MSRT Rec
$ 0
Total MSRT Rec
$ 0
Budget Category:ProvinceExpense
Comments:
NPCC Staff Comments: WA

Local or MSRT Comments: It appears that there may be duplication with project number 200301000. If recommended for funding these two projects should be closely coordinated. This project will direct on-the-ground work in the Estuary Province, and therefore should be prioritized


NPCC Draft Funding Recommendations (September 15, 2006) [Full NPCC Council Recs]

FY 2007 Budget
$ 0
FY 2008 Budget
$ 0
FY 2009 Budget
$ 0
Total NPCC Rec
$ 0
FY 2007 MSRT Rec
$ 0
FY 2008 MSRT Rec
$ 0
FY 2009 MSRT Rec
$ 0
Total MSRT Rec
$ 0
Budget Category:ProvinceExpense
Comments:

Local or MSRT Comments: See Washington guidance


Independent Scientific Review Panel Final Review (August 31, 2006) [Download full document]

Recommendation: Not fundable
NPCC Comments: The initial proposal was fraught with specialized jargon, but the detailed response made it much easier for the ISRP to review this innovative proposal. There is no doubt the work proposed would provide worthwhile research data on the historical changes in the productivity proxies chosen (total carbon, organic carbon, organic nitrogen, delta C13 and delta N15). The investigators are well qualified to do this kind of research and are leaders in their fields.

The ISRP asked the proponents to explain how the historical data would relate to current indicators of ecosystem health. The proponent’s response did not specify how their broad geochemical approach would account for important dynamic aspects of food web ecology in the Columbia River estuary. Published research has shown that factors such as living space, temperature, flow, and others, interact with productivity to determine salmon survival. Based on current scientific knowledge, the assumption of a direct relationship between carbon production in the estuary and salmon is not defensible.

Comparison of carbon production in the Columbia River estuary with Grays Harbor and Willapa Bay would be an interesting research question. However, extrapolation from the latter two areas to the Columbia River estuary is problematic because the latter two estuaries have had different sorts of histories and perturbations. Historical baselines of the three estuaries are likely not directly comparable.

The application of the data to management actions was queried by the ISRP. This aspect remains a weak point and is a primary reason why the project is not fundable. While the proponents have good working relationships with researchers in the estuary, collaboration with LCREP and other restoration-oriented management agencies is not as evident. For example there is no mention of the present project in the LCREP’s proposal 200301100, and in fact this group has a different conceptual model that they are using to plan restoration. Historically, a mosaic of habitats existed in the estuary (including marshes, mudflats, riparian, and others) at different elevations with characteristic vegetation units. It is difficult to see how the core information from the limited number of sites mentioned in the proposal would help plan the restoration of these complexes.

The ISRP appreciated the detailed answer to the question of how the core data would be controlled to accurately document historical changes.


Independent Scientific Review Panel Preliminary Review (June 2, 2006) [Download full document]

Recommendation: Not fundable
NPCC Comments: The ISRP reviewed a somewhat similar proposal previously in the AFEP review in 2004. It was not funded. The emphasis of that proposal was to use cores to investigate historical trends in contaminants. The present proposal deals with historical trends in levels of organic material, again using cores. Carbon and nitrogen are proposed as surrogates for productivity supporting fish and wildlife. Stable isotopes will be used to separate periods of marine and freshwater sources of productivity as well as human activities (eg dam construction). While this could be an innovative approach there are number of problems with the proposal.

The way the proposal is written seriously detracts from its value and makes a fair evaluation of its merits very difficult. Better explanations of the work are required. The proposal is fraught with specialized jargon.

The investigators need to provide more detail about how this work will relate directly to estuary restoration. The key question would be whether measurements of sediment attributes provide the appropriate indicators of habitat or aquatic community health. How would the link be made between variables of interest to paleoecologists and current indicators of ecosystem health? The proposal needs much more detail as to how it would apply the core sample data to answer current restoration questions, and how it would tie in with other projects that also are looking at historical conditions and their relation to the present (e.g., 200301000). Historically there was a mosaic of habitats in the estuary (including marshes, mudflats, riparian, and others) at different elevations. It is difficult to see how the core information from a limited number of sites would help plan the restoration of these complexes.

Additionally, to accurately document historical changes requires that the cores be taken from sites that are neither depositional nor erosional. How will the investigators ensure that sample sites meet this criterion?

Collaborative work is mainly internal, i.e., with USGS and other agencies interested in the sediment record. It would be more effective if other key agencies directly involved in restoration planning and fish and wildlife research and management were involved in the project instead of merely being "informed" about the work.

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